Description : cation exchanger 3
Gene families : OG_01_0007108 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007108_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G141800.1 | |
Cluster | Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_146 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006812 | monoatomic cation transport | ISM | GOs from InterProScan |
BP | GO:0006816 | calcium ion transport | ISM | GOs from InterProScan |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | ISM | GOs from InterProScan |
MF | GO:0015369 | calcium:proton antiporter activity | ISM | GOs from InterProScan |
BP | GO:0055085 | transmembrane transport | ISM | GOs from InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Source | Start | Stop |
---|---|---|---|---|
IPR044880 | NCX_ion-bd_dom_sf | Gene3D | 278 | 437 |
IPR044880 | NCX_ion-bd_dom_sf | Gene3D | 131 | 274 |
IPR004837 | NaCa_Exmemb | Pfam | 293 | 436 |
IPR004837 | NaCa_Exmemb | Pfam | 101 | 260 |
IPR004798 | CAX-like | NCBIfam | 84 | 436 |
IPR004713 | CaH_exchang | PANTHER | 58 | 437 |
IPR004837 | NaCa_Exmemb | Pfam | 293 | 435 |
IPR004837 | NaCa_Exmemb | Pfam | 101 | 260 |
IPR004713 | CaH_exchang | PANTHER | 11 | 444 |
IPR004798 | CAX-like | TIGRFAM | 84 | 436 |
IPR044880 | NCX_ion-bd_dom_sf | Gene3D | 278 | 437 |
IPR044880 | NCX_ion-bd_dom_sf | Gene3D | 131 | 274 |
No CAZYmes available for this sequence
No external refs found! |