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  5. Seita.1G143300.1

Seita.1G143300.1


Description : MEI2-like protein 5


Gene families : OG_01_0128464 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0128464_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G143300.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_262


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR034454 MEI2-like_RRM3 CDD 660 745
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 184 278
IPR035979 RBD_domain_sf SUPERFAMILY 659 743
IPR000504 RRM_dom ProSiteProfiles 279 352
IPR034453 MEI2-like_RRM1 CDD 193 269
IPR007201 Mei2-like_Rrm_C Pfam 657 753
IPR000504 RRM_dom SMART 659 736
IPR000504 RRM_dom SMART 280 348
IPR000504 RRM_dom SMART 195 263
IPR000504 RRM_dom Pfam 196 260
IPR000504 RRM_dom Pfam 281 346
IPR000504 RRM_dom ProSiteProfiles 194 267
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 279 376
IPR035979 RBD_domain_sf SUPERFAMILY 191 353
IPR035979 RBD_domain_sf SUPERFAMILY 659 743
IPR000504 RRM_dom Pfam 281 346
IPR000504 RRM_dom Pfam 196 260
IPR000504 RRM_dom SMART 659 736
IPR000504 RRM_dom SMART 280 348
IPR000504 RRM_dom SMART 195 263
IPR000504 RRM_dom ProSiteProfiles 194 267
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 279 376
IPR034453 MEI2-like_RRM1 CDD 193 269
IPR000504 RRM_dom ProSiteProfiles 279 352
IPR007201 Mei2-like_Rrm_C Pfam 657 753
IPR034454 MEI2-like_RRM3 CDD 660 745
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 184 278
IPR035979 RBD_domain_sf SUPERFAMILY 191 353

No CAZYmes available for this sequence

No external refs found!