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  5. Seita.1G148900.1

Seita.1G148900.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0000062 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000062_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G148900.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin PANTHER 15 260
IPR001938 Thaumatin Pfam 39 260
IPR001938 Thaumatin PIRSF 2 297
IPR037176 Osmotin/thaumatin-like_sf Gene3D 33 260
IPR001938 Thaumatin SMART 35 260
IPR001938 Thaumatin PRINTS 134 150
IPR001938 Thaumatin PRINTS 34 46
IPR001938 Thaumatin PRINTS 82 93
IPR001938 Thaumatin ProSiteProfiles 32 260
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 33 261
IPR001938 Thaumatin PANTHER 5 277
IPR001938 Thaumatin PIRSF 2 297
IPR001938 Thaumatin PRINTS 134 150
IPR001938 Thaumatin PRINTS 34 46
IPR001938 Thaumatin PRINTS 82 93
IPR037176 Osmotin/thaumatin-like_sf Gene3D 33 260
IPR001938 Thaumatin Pfam 39 260
IPR001938 Thaumatin SMART 35 260
IPR001938 Thaumatin ProSiteProfiles 32 260
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 33 261
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 310 2.6e-91 39 260
No external refs found!