Seita.1G161300.1

Description : CTC-interacting domain 4

Gene families : OG_01_0008051 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008051_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G161300.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR009604	LsmAD_domain	Pfam	218	288
IPR047575	Sm	ProSiteProfiles	64	147
IPR009604	LsmAD_domain	SMART	218	289
IPR045117	ATXN2-like	PANTHER	14	595
IPR025852	SM_dom_ATX	Pfam	62	144
IPR009818	Ataxin-2_C	Pfam	488	499
IPR045117	ATXN2-like	PANTHER	5	599
IPR009604	LsmAD_domain	Pfam	218	288
IPR025852	SM_dom_ATX	Pfam	62	144
IPR009818	Ataxin-2_C	Pfam	488	500
IPR009604	LsmAD_domain	SMART	218	289

No CAZYmes available for this sequence

External Links

No external refs found!