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  5. Seita.1G173300.1

Seita.1G173300.1


Description : MEI2-like protein 1


Gene families : OG_01_0005980 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005980_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G173300.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 783 902
IPR007201 Mei2-like_Rrm_C Pfam 818 914
IPR035979 RBD_domain_sf SUPERFAMILY 820 904
IPR034454 MEI2-like_RRM3 CDD 821 906
IPR000504 RRM_dom Pfam 357 422
IPR000504 RRM_dom Pfam 272 336
IPR034453 MEI2-like_RRM1 CDD 269 345
IPR000504 RRM_dom SMART 356 424
IPR000504 RRM_dom SMART 271 339
IPR000504 RRM_dom SMART 820 896
IPR000504 RRM_dom ProSiteProfiles 270 343
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 354 441
IPR000504 RRM_dom ProSiteProfiles 355 428
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 258 353
IPR035979 RBD_domain_sf SUPERFAMILY 267 425
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 354 441
IPR035979 RBD_domain_sf SUPERFAMILY 820 904
IPR000504 RRM_dom SMART 356 424
IPR000504 RRM_dom SMART 820 896
IPR000504 RRM_dom SMART 271 339
IPR034454 MEI2-like_RRM3 CDD 821 906
IPR034453 MEI2-like_RRM1 CDD 269 345
IPR000504 RRM_dom Pfam 357 422
IPR000504 RRM_dom Pfam 272 336
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 258 353
IPR000504 RRM_dom ProSiteProfiles 270 343
IPR007201 Mei2-like_Rrm_C Pfam 818 914
IPR000504 RRM_dom ProSiteProfiles 355 428
IPR035979 RBD_domain_sf SUPERFAMILY 267 425
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 783 902

No CAZYmes available for this sequence

No external refs found!