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  5. Seita.1G178600.1

Seita.1G178600.1


Description : D-mannose binding lectin protein with Apple-like carbohydrate-binding domain


Gene families : OG_01_0015073 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015073_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G178600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_82


Type GO Term Name Evidence Source
BP GO:0048544 recognition of pollen ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001480 Bulb-type_lectin_dom Pfam 103 178
IPR036426 Bulb-type_lectin_dom_sf Gene3D 42 165
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 43 162
IPR001480 Bulb-type_lectin_dom SMART 49 167
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 90 256
IPR003609 Pan_app Pfam 382 419
IPR000858 S_locus_glycoprot_dom Pfam 270 327
IPR000858 S_locus_glycoprot_dom Pfam 270 327
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 90 256
IPR001480 Bulb-type_lectin_dom Pfam 103 178
IPR001480 Bulb-type_lectin_dom SMART 49 167
IPR036426 Bulb-type_lectin_dom_sf Gene3D 42 165
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 43 162

No CAZYmes available for this sequence

No external refs found!