Seita.1G197100.1

Description : Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein

Gene families : OG_01_0004182 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004182_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G197100.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001878	Znf_CCHC	ProSiteProfiles	261	277
IPR006568	PSP_pro-rich	Pfam	319	356
IPR036875	Znf_CCHC_sf	SUPERFAMILY	248	281
IPR006568	PSP_pro-rich	SMART	315	369
IPR036875	Znf_CCHC_sf	SUPERFAMILY	248	281
IPR006568	PSP_pro-rich	Pfam	319	356
IPR001878	Znf_CCHC	ProSiteProfiles	261	277
IPR006568	PSP_pro-rich	SMART	315	369

No CAZYmes available for this sequence

External Links

No external refs found!