Seita.1G199800.1

Description : ATP-dependent Clp protease

Gene families : OG_01_0000248 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000248_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G199800.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_88

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006457	protein folding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0051082	unfolded protein binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027417	P-loop_NTPase	SUPERFAMILY	230	592
IPR019489	Clp_ATPase_C	SMART	506	599
IPR003959	ATPase_AAA_core	Pfam	295	499
IPR027417	P-loop_NTPase	Gene3D	225	504
IPR004487	Clp_protease_ATP-bd_su_ClpX	NCBIfam	229	598
IPR003593	AAA+_ATPase	SMART	295	457
IPR019489	Clp_ATPase_C	Pfam	506	576
IPR019489	Clp_ATPase_C	SMART	506	599
IPR027417	P-loop_NTPase	SUPERFAMILY	230	592
IPR004487	Clp_protease_ATP-bd_su_ClpX	TIGRFAM	229	598
IPR003959	ATPase_AAA_core	Pfam	295	499
IPR019489	Clp_ATPase_C	Pfam	506	577
IPR027417	P-loop_NTPase	Gene3D	225	504
IPR003593	AAA+_ATPase	SMART	295	457

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.1G199800.1

Expression Profile

Co-expression Networks

Functional Annotation