Sevir.6G042200.1


Description : polymerase gamma 2


Gene families : OG_01_0001143 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001143_tree

Sequence : cds (download), rna (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G042200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G042200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_123
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_48


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0003887 DNA-directed DNA polymerase activity ISM GOs from InterProScan
BP GO:0006139 nucleobase-containing compound metabolic process ISM GOs from InterProScan
BP GO:0006260 DNA replication ISM GOs from InterProScan
BP GO:0006261 DNA-templated DNA replication ISM GOs from InterProScan
MF GO:0008408 3'-5' exonuclease activity ISM GOs from InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Source Start Stop
IPR002298 DNA_polymerase_A PANTHER 11 1018
IPR036397 RNaseH_sf Gene3D 246 503
IPR001098 DNA-dir_DNA_pol_A_palm_dom Pfam 684 1015
IPR001098 DNA-dir_DNA_pol_A_palm_dom SMART 748 978
IPR043502 DNA/RNA_pol_sf SUPERFAMILY 484 1018
IPR002298 DNA_polymerase_A PRINTS 760 783
IPR002298 DNA_polymerase_A PRINTS 738 753
IPR002298 DNA_polymerase_A PRINTS 790 803
IPR002298 DNA_polymerase_A PRINTS 931 947
IPR002298 DNA_polymerase_A PRINTS 961 974
IPR002298 DNA_polymerase_A PRINTS 715 737
IPR002562 3'-5'_exonuclease_dom Pfam 297 470
IPR012337 RNaseH-like_sf SUPERFAMILY 244 470

No CAZYmes available for this sequence

No external refs found!