Description : polymerase gamma 2
Gene families : OG_01_0001143 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001143_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G042200.1 | |
Neighborhood | Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G042200.1 | |
Cluster | Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_123 | |
Cluster | Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_48 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | ISM | GOs from InterProScan |
MF | GO:0003677 | DNA binding | ISM | GOs from InterProScan |
MF | GO:0003887 | DNA-directed DNA polymerase activity | ISM | GOs from InterProScan |
BP | GO:0006139 | nucleobase-containing compound metabolic process | ISM | GOs from InterProScan |
BP | GO:0006260 | DNA replication | ISM | GOs from InterProScan |
BP | GO:0006261 | DNA-templated DNA replication | ISM | GOs from InterProScan |
MF | GO:0008408 | 3'-5' exonuclease activity | ISM | GOs from InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Source | Start | Stop |
---|---|---|---|---|
IPR002298 | DNA_polymerase_A | PANTHER | 11 | 1018 |
IPR036397 | RNaseH_sf | Gene3D | 246 | 503 |
IPR001098 | DNA-dir_DNA_pol_A_palm_dom | Pfam | 684 | 1015 |
IPR001098 | DNA-dir_DNA_pol_A_palm_dom | SMART | 748 | 978 |
IPR043502 | DNA/RNA_pol_sf | SUPERFAMILY | 484 | 1018 |
IPR002298 | DNA_polymerase_A | PRINTS | 760 | 783 |
IPR002298 | DNA_polymerase_A | PRINTS | 738 | 753 |
IPR002298 | DNA_polymerase_A | PRINTS | 790 | 803 |
IPR002298 | DNA_polymerase_A | PRINTS | 931 | 947 |
IPR002298 | DNA_polymerase_A | PRINTS | 961 | 974 |
IPR002298 | DNA_polymerase_A | PRINTS | 715 | 737 |
IPR002562 | 3'-5'_exonuclease_dom | Pfam | 297 | 470 |
IPR012337 | RNaseH-like_sf | SUPERFAMILY | 244 | 470 |
No CAZYmes available for this sequence
No external refs found! |