Seita.1G229100.1

Description : RNA binding

Gene families : OG_01_0007916 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007916_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G229100.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_168

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004435	phosphatidylinositol phospholipase C activity	ISM	GOs from InterProScan
MF	GO:0004620	phospholipase activity	None	Extended
MF	GO:0004629	phospholipase C activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006629	lipid metabolic process	ISM	GOs from InterProScan
BP	GO:0007165	signal transduction	ISM	GOs from InterProScan
MF	GO:0008081	phosphoric diester hydrolase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016298	lipase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0035556	intracellular signal transduction	ISM	GOs from InterProScan
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR046761	Tab2-like_C	Pfam	177	390
IPR046760	Tab2-like_N	Pfam	116	168
IPR001711	PLipase_C_Pinositol-sp_Y	ProSiteProfiles	300	351
IPR009472	Tab2-like	PANTHER	11	398
IPR001711	PLipase_C_Pinositol-sp_Y	ProSiteProfiles	300	351
IPR009472	Tab2-like	PANTHER	62	398
IPR009472	Tab2-like	Pfam	116	390

No CAZYmes available for this sequence

External Links

No external refs found!