1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.1G232700.1

Seita.1G232700.1


Description : Leucine-rich repeat protein kinase family protein


Gene families : OG_01_0000340 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000340_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G232700.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_115


Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006468 protein phosphorylation ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001611 Leu-rich_rpt ProSiteProfiles 596 619
IPR013210 LRR_N_plant-typ Pfam 41 79
IPR003591 Leu-rich_rpt_typical-subtyp SMART 546 569
IPR003591 Leu-rich_rpt_typical-subtyp SMART 498 521
IPR003591 Leu-rich_rpt_typical-subtyp SMART 274 298
IPR003591 Leu-rich_rpt_typical-subtyp SMART 377 400
IPR003591 Leu-rich_rpt_typical-subtyp SMART 347 370
IPR003591 Leu-rich_rpt_typical-subtyp SMART 450 474
IPR003591 Leu-rich_rpt_typical-subtyp SMART 226 249
IPR003591 Leu-rich_rpt_typical-subtyp SMART 299 323
IPR003591 Leu-rich_rpt_typical-subtyp SMART 618 643
IPR003591 Leu-rich_rpt_typical-subtyp SMART 130 153
IPR003591 Leu-rich_rpt_typical-subtyp SMART 594 617
IPR032675 LRR_dom_sf Gene3D 367 672
IPR032675 LRR_dom_sf Gene3D 189 252
IPR000719 Prot_kinase_dom Pfam 737 998
IPR000719 Prot_kinase_dom SMART 735 1044
IPR032675 LRR_dom_sf Gene3D 39 188
IPR001611 Leu-rich_rpt Pfam 549 570
IPR001611 Leu-rich_rpt Pfam 156 177
IPR001611 Leu-rich_rpt Pfam 379 401
IPR001611 Leu-rich_rpt Pfam 500 522
IPR001611 Leu-rich_rpt Pfam 228 247
IPR001611 Leu-rich_rpt Pfam 109 125
IPR032675 LRR_dom_sf Gene3D 255 366
IPR011009 Kinase-like_dom_sf SUPERFAMILY 712 1035
IPR001611 Leu-rich_rpt Pfam 590 631
IPR001611 Leu-rich_rpt Pfam 429 487
IPR001611 Leu-rich_rpt Pfam 300 360
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 865 877
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 741 764
IPR000719 Prot_kinase_dom ProSiteProfiles 735 1040
IPR001611 Leu-rich_rpt Pfam 429 487
IPR001611 Leu-rich_rpt Pfam 300 360
IPR001611 Leu-rich_rpt Pfam 132 191
IPR001611 Leu-rich_rpt Pfam 572 631
IPR013210 LRR_N_plant-typ Pfam 41 78
IPR032675 LRR_dom_sf Gene3D 255 366
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 741 764
IPR000719 Prot_kinase_dom ProSiteProfiles 735 1040
IPR011009 Kinase-like_dom_sf SUPERFAMILY 712 1035
IPR000719 Prot_kinase_dom SMART 735 1044
IPR032675 LRR_dom_sf Gene3D 189 252
IPR003591 Leu-rich_rpt_typical-subtyp SMART 498 521
IPR003591 Leu-rich_rpt_typical-subtyp SMART 546 569
IPR003591 Leu-rich_rpt_typical-subtyp SMART 274 298
IPR003591 Leu-rich_rpt_typical-subtyp SMART 377 400
IPR003591 Leu-rich_rpt_typical-subtyp SMART 347 370
IPR003591 Leu-rich_rpt_typical-subtyp SMART 299 323
IPR003591 Leu-rich_rpt_typical-subtyp SMART 450 474
IPR003591 Leu-rich_rpt_typical-subtyp SMART 226 249
IPR003591 Leu-rich_rpt_typical-subtyp SMART 618 643
IPR003591 Leu-rich_rpt_typical-subtyp SMART 130 153
IPR003591 Leu-rich_rpt_typical-subtyp SMART 594 617
IPR001611 Leu-rich_rpt ProSiteProfiles 596 619
IPR032675 LRR_dom_sf Gene3D 367 672
IPR000719 Prot_kinase_dom Pfam 736 997
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 865 877
IPR032675 LRR_dom_sf Gene3D 39 188

No CAZYmes available for this sequence

No external refs found!