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  5. Seita.1G238400.1

Seita.1G238400.1


Description : Long-chain fatty alcohol dehydrogenase family protein


Gene families : OG_01_0001033 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001033_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G238400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94


Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors ISM GOs from InterProScan
MF GO:0046577 long-chain-alcohol oxidase activity ISM GOs from InterProScan
MF GO:0050660 flavin adenine dinucleotide binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000172 GMC_OxRdtase_N Pfam 304 527
IPR007867 GMC_OxRtase_C Pfam 625 758
IPR012400 Long_Oxdase PIRSF 12 772
IPR036188 FAD/NAD-bd_sf Gene3D 242 559
IPR036188 FAD/NAD-bd_sf SUPERFAMILY 256 768
IPR036188 FAD/NAD-bd_sf Gene3D 672 766
IPR000172 GMC_OxRdtase_N Pfam 259 528
IPR012400 Long_Oxdase PIRSF 12 772
IPR036188 FAD/NAD-bd_sf Gene3D 672 766
IPR007867 GMC_OxRtase_C Pfam 625 758
IPR036188 FAD/NAD-bd_sf SUPERFAMILY 256 768
IPR036188 FAD/NAD-bd_sf Gene3D 242 559
HMM Family HMM Length Query Length e-Value Query Start Query End
AA3 618 774 4.4e-42 255 769
No external refs found!