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  5. Seita.1G243200.1

Seita.1G243200.1


Description : ARF-GAP domain 2


Gene families : OG_01_0002611 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002611_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G243200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_116


Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001164 ArfGAP_dom Pfam 467 591
IPR038508 ArfGAP_dom_sf Gene3D 446 600
IPR002110 Ankyrin_rpt SMART 703 732
IPR002110 Ankyrin_rpt SMART 670 699
IPR001849 PH_domain SMART 294 425
IPR001849 PH_domain ProSiteProfiles 293 423
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 669 744
IPR002110 Ankyrin_rpt ProSiteProfiles 703 735
IPR027267 AH/BAR_dom_sf SUPERFAMILY 7 316
IPR002110 Ankyrin_rpt ProSiteProfiles 670 702
IPR001164 ArfGAP_dom ProSiteProfiles 465 601
IPR001849 PH_domain Pfam 294 422
IPR004148 BAR_dom ProSiteProfiles 2 226
IPR045258 ACAP1/2/3-like PANTHER 6 758
IPR004148 BAR_dom SMART 12 219
IPR035670 AGD1/2/3/4_BAR_plant CDD 15 216
IPR001164 ArfGAP_dom SMART 465 601
IPR027267 AH/BAR_dom_sf Gene3D 5 253
IPR037278 ARFGAP/RecO SUPERFAMILY 465 593
IPR036770 Ankyrin_rpt-contain_sf Gene3D 601 750
IPR001164 ArfGAP_dom PRINTS 477 496
IPR001164 ArfGAP_dom PRINTS 496 513
IPR011993 PH-like_dom_sf Gene3D 286 433
IPR002110 Ankyrin_rpt Pfam 670 734
IPR004148 BAR_dom Pfam 7 236
IPR002110 Ankyrin_rpt SMART 703 732
IPR002110 Ankyrin_rpt SMART 670 699
IPR001164 ArfGAP_dom ProSiteProfiles 465 601
IPR001849 PH_domain SMART 294 425
IPR036770 Ankyrin_rpt-contain_sf Gene3D 601 750
IPR027267 AH/BAR_dom_sf Gene3D 5 253
IPR001164 ArfGAP_dom SMART 465 601
IPR004148 BAR_dom SMART 12 219
IPR001849 PH_domain ProSiteProfiles 293 423
IPR035670 AGD1/2/3/4_BAR_plant CDD 15 216
IPR045258 ACAP1/2/3-like PANTHER 1 759
IPR038508 ArfGAP_dom_sf Gene3D 446 600
IPR011993 PH-like_dom_sf Gene3D 286 433
IPR037278 ARFGAP/RecO SUPERFAMILY 465 593
IPR002110 Ankyrin_rpt ProSiteProfiles 670 702
IPR004148 BAR_dom ProSiteProfiles 2 226
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 669 744
IPR001164 ArfGAP_dom PRINTS 477 496
IPR001164 ArfGAP_dom PRINTS 496 513
IPR001164 ArfGAP_dom Pfam 468 593
IPR002110 Ankyrin_rpt ProSiteProfiles 703 735
IPR027267 AH/BAR_dom_sf SUPERFAMILY 7 316
IPR002110 Ankyrin_rpt Pfam 671 710
IPR001849 PH_domain Pfam 294 422

No CAZYmes available for this sequence

No external refs found!