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  5. Seita.1G273600.1

Seita.1G273600.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0003385 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003385_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G273600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 29 304
IPR001680 WD40_rpt ProSiteProfiles 180 220
IPR045159 DCAF7-like PANTHER 13 359
IPR019775 WD40_repeat_CS ProSitePatterns 289 303
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 133 359
IPR001680 WD40_rpt SMART 124 170
IPR001680 WD40_rpt SMART 73 112
IPR001680 WD40_rpt SMART 262 302
IPR001680 WD40_rpt SMART 173 211
IPR001680 WD40_rpt ProSiteProfiles 269 303
IPR001680 WD40_rpt Pfam 178 211
IPR001680 WD40_rpt Pfam 264 301
IPR019775 WD40_repeat_CS ProSitePatterns 289 303
IPR001680 WD40_rpt ProSiteProfiles 269 303
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 133 359
IPR001680 WD40_rpt SMART 124 170
IPR001680 WD40_rpt SMART 73 112
IPR001680 WD40_rpt SMART 262 302
IPR001680 WD40_rpt SMART 173 211
IPR001680 WD40_rpt Pfam 180 211
IPR001680 WD40_rpt ProSiteProfiles 180 220
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 29 304
IPR045159 DCAF7-like PANTHER 12 359

No CAZYmes available for this sequence

No external refs found!