Seita.1G279000.1

Description : Clathrin adaptor complexes medium subunit family protein

Gene families : OG_01_0012355 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012355_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G279000.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030131	clathrin adaptor complex	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR043532	AP2_Mu_N	CDD	6	144
IPR028565	MHD	Pfam	167	438
IPR043512	Mu2_C	CDD	175	437
IPR028565	MHD	ProSiteProfiles	177	437
IPR011012	Longin-like_dom_sf	SUPERFAMILY	6	142
IPR001392	Clathrin_mu	PRINTS	357	368
IPR001392	Clathrin_mu	PRINTS	168	196
IPR001392	Clathrin_mu	PRINTS	248	275
IPR001392	Clathrin_mu	PRINTS	317	332
IPR001392	Clathrin_mu	PRINTS	102	129
IPR001392	Clathrin_mu	PRINTS	15	35
IPR036168	AP2_Mu_C_sf	SUPERFAMILY	166	437
IPR018240	Clathrin_mu_CS	ProSitePatterns	166	186
IPR001392	Clathrin_mu	PIRSF	4	438
IPR028565	MHD	ProSiteProfiles	177	437
IPR028565	MHD	Pfam	167	438
IPR001392	Clathrin_mu	PIRSF	4	438
IPR001392	Clathrin_mu	PRINTS	357	368
IPR001392	Clathrin_mu	PRINTS	168	196
IPR001392	Clathrin_mu	PRINTS	248	275
IPR001392	Clathrin_mu	PRINTS	317	332
IPR001392	Clathrin_mu	PRINTS	102	129
IPR001392	Clathrin_mu	PRINTS	15	35
IPR011012	Longin-like_dom_sf	SUPERFAMILY	6	142
IPR036168	AP2_Mu_C_sf	SUPERFAMILY	166	437
IPR043532	AP2_Mu_N	CDD	6	144
IPR018240	Clathrin_mu_CS	ProSitePatterns	166	186
IPR043512	Mu2_C	CDD	175	437

No CAZYmes available for this sequence

External Links

No external refs found!