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  5. Seita.1G305100.1

Seita.1G305100.1


Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein


Gene families : OG_01_0004812 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004812_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G305100.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_82


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISM GOs from InterProScan
CC GO:0005730 nucleolus ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 64 77
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 90 104
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 80 90
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 45 59
IPR029064 Ribosomal_eL30-like_sf SUPERFAMILY 14 132
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 18 31
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 48 58
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 31 46
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 92 104
IPR029064 Ribosomal_eL30-like_sf Gene3D 13 140
IPR004038 Ribosomal_eL8/eL30/eS12/Gad45 Pfam 33 117
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 18 31
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 48 58
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 31 46
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 92 104
IPR029064 Ribosomal_eL30-like_sf SUPERFAMILY 14 132
IPR004038 Ribosomal_eL8/eL30/eS12/Gad45 Pfam 33 117
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 64 77
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 90 104
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 80 90
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 45 59
IPR029064 Ribosomal_eL30-like_sf Gene3D 13 140

No CAZYmes available for this sequence

No external refs found!