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  5. Seita.1G320000.1

Seita.1G320000.1


Description : pumilio 23


Gene families : OG_01_0003787 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003787_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G320000.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016024 ARM-type_fold SUPERFAMILY 131 355
IPR016024 ARM-type_fold SUPERFAMILY 306 662
IPR040000 NOP9 PANTHER 29 704
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 586 621
IPR001313 Pumilio_RNA-bd_rpt SMART 184 219
IPR001313 Pumilio_RNA-bd_rpt SMART 148 183
IPR001313 Pumilio_RNA-bd_rpt SMART 549 585
IPR001313 Pumilio_RNA-bd_rpt SMART 406 442
IPR001313 Pumilio_RNA-bd_rpt SMART 586 621
IPR001313 Pumilio_RNA-bd_rpt Pfam 414 444
IPR001313 Pumilio_RNA-bd_rpt Pfam 553 571
IPR001313 Pumilio_RNA-bd_rpt Pfam 590 624
IPR011989 ARM-like Gene3D 93 475
IPR011989 ARM-like Gene3D 520 669
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 406 442
IPR001313 Pumilio_RNA-bd_rpt Pfam 553 571
IPR001313 Pumilio_RNA-bd_rpt Pfam 413 444
IPR001313 Pumilio_RNA-bd_rpt Pfam 590 624
IPR011989 ARM-like Gene3D 93 475
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 586 621
IPR016024 ARM-type_fold SUPERFAMILY 306 662
IPR016024 ARM-type_fold SUPERFAMILY 131 355
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 406 442
IPR011989 ARM-like Gene3D 520 669
IPR040000 NOP9 PANTHER 29 774
IPR001313 Pumilio_RNA-bd_rpt SMART 184 219
IPR001313 Pumilio_RNA-bd_rpt SMART 148 183
IPR001313 Pumilio_RNA-bd_rpt SMART 406 442
IPR001313 Pumilio_RNA-bd_rpt SMART 549 585
IPR001313 Pumilio_RNA-bd_rpt SMART 586 621

No CAZYmes available for this sequence

No external refs found!