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  5. Seita.1G324900.1

Seita.1G324900.1


Description : translocon at the outer membrane of chloroplasts 64-V


Gene families : OG_01_0006985 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006985_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G324900.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_82


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR023631 Amidase_dom Pfam 78 231
IPR036928 AS_sf Gene3D 28 469
IPR019734 TPR_repeat ProSiteProfiles 498 531
IPR036928 AS_sf SUPERFAMILY 37 464
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 493 612
IPR011990 TPR-like_helical_dom_sf Gene3D 489 597
IPR001440 TPR_1 Pfam 533 565
IPR019734 TPR_repeat ProSiteProfiles 532 565
IPR019734 TPR_repeat ProSiteProfiles 566 599
IPR019734 TPR_repeat SMART 498 531
IPR019734 TPR_repeat SMART 566 599
IPR019734 TPR_repeat SMART 532 565
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 493 612
IPR019734 TPR_repeat ProSiteProfiles 532 565
IPR023631 Amidase_dom Pfam 78 231
IPR019734 TPR_repeat ProSiteProfiles 498 531
IPR036928 AS_sf Gene3D 28 469
IPR036928 AS_sf SUPERFAMILY 37 464
IPR011990 TPR-like_helical_dom_sf Gene3D 489 597
IPR019734 TPR_repeat SMART 498 531
IPR019734 TPR_repeat SMART 566 599
IPR019734 TPR_repeat SMART 532 565
IPR001440 TPR_1 Pfam 533 565
IPR019734 TPR_repeat ProSiteProfiles 566 599

No CAZYmes available for this sequence

No external refs found!