Seita.1G349300.1

Description : Translation initiation factor 3 protein

Gene families : OG_01_0005099 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005099_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G349300.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_234

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001288	Translation_initiation_fac_3	NCBIfam	97	260
IPR036787	T_IF-3_N_sf	SUPERFAMILY	96	168
IPR036788	T_IF-3_C_sf	SUPERFAMILY	177	260
IPR036787	T_IF-3_N_sf	Gene3D	96	168
IPR019814	Translation_initiation_fac_3_N	Pfam	96	164
IPR019815	Translation_initiation_fac_3_C	Pfam	176	259
IPR001288	Translation_initiation_fac_3	PANTHER	36	300
IPR036788	T_IF-3_C_sf	Gene3D	171	267
IPR036787	T_IF-3_N_sf	SUPERFAMILY	96	168
IPR001288	Translation_initiation_fac_3	TIGRFAM	97	260
IPR036787	T_IF-3_N_sf	Gene3D	96	168
IPR036788	T_IF-3_C_sf	SUPERFAMILY	177	260
IPR019814	Translation_initiation_fac_3_N	Pfam	97	164
IPR036788	T_IF-3_C_sf	Gene3D	171	267
IPR019815	Translation_initiation_fac_3_C	Pfam	176	259
IPR001288	Translation_initiation_fac_3	PANTHER	35	282

No CAZYmes available for this sequence

External Links

No external refs found!