Seita.1G379700.1

Description : senescence-associated E3 ubiquitin ligase 1

Gene families : OG_01_0005799 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005799_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.1G379700.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016024	ARM-type_fold	SUPERFAMILY	279	811
IPR045210	RING-Ubox_PUB	CDD	29	85
IPR000225	Armadillo	SMART	728	769
IPR000225	Armadillo	SMART	138	179
IPR000225	Armadillo	SMART	307	346
IPR000225	Armadillo	SMART	682	722
IPR000225	Armadillo	SMART	593	633
IPR000225	Armadillo	SMART	266	306
IPR000225	Armadillo	SMART	447	488
IPR000225	Armadillo	SMART	347	392
IPR000225	Armadillo	SMART	181	221
IPR003613	Ubox_domain	ProSiteProfiles	26	105
IPR016024	ARM-type_fold	SUPERFAMILY	120	441
IPR011989	ARM-like	Gene3D	576	823
IPR006911	ARM-rpt_dom	Pfam	246	359
IPR003613	Ubox_domain	Pfam	29	103
IPR011989	ARM-like	Gene3D	286	487
IPR003613	Ubox_domain	SMART	30	98
IPR011989	ARM-like	Gene3D	99	285
IPR013083	Znf_RING/FYVE/PHD	Gene3D	20	98
IPR003613	Ubox_domain	Pfam	29	103
IPR003613	Ubox_domain	ProSiteProfiles	26	105
IPR016024	ARM-type_fold	SUPERFAMILY	279	811
IPR011989	ARM-like	Gene3D	576	823
IPR000225	Armadillo	SMART	728	769
IPR000225	Armadillo	SMART	138	179
IPR000225	Armadillo	SMART	307	346
IPR000225	Armadillo	SMART	682	722
IPR000225	Armadillo	SMART	593	633
IPR000225	Armadillo	SMART	266	306
IPR000225	Armadillo	SMART	447	488
IPR000225	Armadillo	SMART	347	392
IPR000225	Armadillo	SMART	181	221
IPR003613	Ubox_domain	SMART	30	98
IPR013083	Znf_RING/FYVE/PHD	Gene3D	20	98
IPR045210	RING-Ubox_PUB	CDD	31	77
IPR011989	ARM-like	Gene3D	99	285
IPR011989	ARM-like	Gene3D	286	487
IPR016024	ARM-type_fold	SUPERFAMILY	120	441

No CAZYmes available for this sequence

External Links

No external refs found!