Sevir.6G057600.1

Description : GDP-D-mannose 3\',5\'-epimerase

Gene families : OG_01_0001796 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001796_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G057600.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G057600.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_153
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_33

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016854	racemase and epimerase activity	None	Extended
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0047918	GDP-mannose 3,5-epimerase activity	ISM	GOs from InterProScan
MF	GO:0051287	NAD binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR033890	GDP-Man_epi	CDD	30	353
IPR001509	Epimerase_deHydtase	Pfam	32	271
IPR036291	NAD(P)-bd_dom_sf	SUPERFAMILY	25	343

No CAZYmes available for this sequence

External Links

No external refs found!