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  4. Sequence
  5. Seita.2G030000.1

Seita.2G030000.1


Description : putative mitochondrial RNA helicase 2


Gene families : OG_01_0004863 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004863_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G030000.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_115


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014001 Helicase_ATP-bd ProSiteProfiles 115 288
IPR014001 Helicase_ATP-bd SMART 103 305
IPR027417 P-loop_NTPase Gene3D 316 460
IPR001650 Helicase_C SMART 342 422
IPR027417 P-loop_NTPase SUPERFAMILY 158 444
IPR011545 DEAD/DEAH_box_helicase_dom Pfam 109 276
IPR027417 P-loop_NTPase Gene3D 85 292
IPR001650 Helicase_C Pfam 314 422
IPR001650 Helicase_C ProSiteProfiles 317 461
IPR027417 P-loop_NTPase Gene3D 85 292
IPR001650 Helicase_C ProSiteProfiles 317 461
IPR027417 P-loop_NTPase SUPERFAMILY 158 444
IPR014001 Helicase_ATP-bd SMART 103 305
IPR001650 Helicase_C SMART 342 422
IPR011545 DEAD/DEAH_box_helicase_dom Pfam 108 276
IPR001650 Helicase_C Pfam 314 422
IPR014001 Helicase_ATP-bd ProSiteProfiles 115 288
IPR027417 P-loop_NTPase Gene3D 316 460

No CAZYmes available for this sequence

No external refs found!