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  5. Seita.2G062000.1

Seita.2G062000.1


Description : PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein


Gene families : OG_01_0015932 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015932_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G062000.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_166


Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013083 Znf_RING/FYVE/PHD Gene3D 135 206
IPR019787 Znf_PHD-finger ProSiteProfiles 140 191
IPR001965 Znf_PHD SMART 142 189
IPR011011 Znf_FYVE_PHD SUPERFAMILY 132 194
IPR001025 BAH_dom SMART 21 138
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 143 188
IPR001025 BAH_dom Pfam 23 136
IPR043151 BAH_sf Gene3D 2 134
IPR001025 BAH_dom ProSiteProfiles 21 138
IPR019787 Znf_PHD-finger Pfam 143 188
IPR013083 Znf_RING/FYVE/PHD Gene3D 135 206
IPR019787 Znf_PHD-finger Pfam 142 190
IPR001025 BAH_dom ProSiteProfiles 21 138
IPR011011 Znf_FYVE_PHD SUPERFAMILY 132 194
IPR001025 BAH_dom Pfam 23 137
IPR043151 BAH_sf Gene3D 2 134
IPR001025 BAH_dom SMART 21 138
IPR019787 Znf_PHD-finger ProSiteProfiles 140 191
IPR001965 Znf_PHD SMART 142 189
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 143 188

No CAZYmes available for this sequence

No external refs found!