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  5. Seita.2G119800.1

Seita.2G119800.1


Description : XB3 ortholog 4 in Arabidopsis thaliana


Gene families : OG_01_0004723 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004723_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G119800.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt Pfam 77 126
IPR002110 Ankyrin_rpt ProSiteProfiles 39 72
IPR001841 Znf_RING ProSiteProfiles 462 501
IPR002110 Ankyrin_rpt SMART 39 69
IPR002110 Ankyrin_rpt SMART 75 104
IPR002110 Ankyrin_rpt SMART 108 136
IPR002110 Ankyrin_rpt ProSiteProfiles 75 107
IPR036770 Ankyrin_rpt-contain_sf Gene3D 3 131
IPR001841 Znf_RING SMART 462 500
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 8 129
IPR013083 Znf_RING/FYVE/PHD Gene3D 444 512
IPR002110 Ankyrin_rpt Pfam 40 69
IPR036770 Ankyrin_rpt-contain_sf Gene3D 3 131
IPR001841 Znf_RING ProSiteProfiles 462 501
IPR001841 Znf_RING SMART 462 500
IPR013083 Znf_RING/FYVE/PHD Gene3D 444 512
IPR002110 Ankyrin_rpt ProSiteProfiles 39 72
IPR002110 Ankyrin_rpt Pfam 77 126
IPR002110 Ankyrin_rpt ProSiteProfiles 75 107
IPR002110 Ankyrin_rpt Pfam 40 69
IPR002110 Ankyrin_rpt SMART 39 69
IPR002110 Ankyrin_rpt SMART 75 104
IPR002110 Ankyrin_rpt SMART 108 136
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 8 129

No CAZYmes available for this sequence

No external refs found!