Seita.2G121700.1

Description : 3\'-5\' exonuclease domain-containing protein

Gene families : OG_01_0003746 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003746_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G121700.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002562	3'-5'_exonuclease_dom	SMART	17	240
IPR002562	3'-5'_exonuclease_dom	Pfam	99	239
IPR012337	RNaseH-like_sf	SUPERFAMILY	8	244
IPR002782	Mut7-C_RNAse_dom	Pfam	340	496
IPR036397	RNaseH_sf	Gene3D	1	272
IPR002562	3'-5'_exonuclease_dom	SMART	17	240
IPR012337	RNaseH-like_sf	SUPERFAMILY	8	244
IPR002782	Mut7-C_RNAse_dom	Pfam	340	496
IPR002562	3'-5'_exonuclease_dom	Pfam	99	239
IPR036397	RNaseH_sf	Gene3D	1	272

No CAZYmes available for this sequence

External Links

No external refs found!