Seita.2G185400.1

Description : isochorismate synthase 2

Gene families : OG_01_0004457 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004457_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G185400.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_57

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008909	isochorismate synthase activity	ISM	GOs from InterProScan
BP	GO:0009058	biosynthetic process	ISM	GOs from InterProScan
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016866	intramolecular transferase activity	None	Extended
MF	GO:0050486	intramolecular hydroxytransferase activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015890	Chorismate_C	Pfam	280	536
IPR004561	IsoChor_synthase	NCBIfam	186	543
IPR044250	MenF-like	PANTHER	26	552
IPR005801	ADC_synthase	SUPERFAMILY	95	544
IPR005801	ADC_synthase	Gene3D	69	547
IPR005801	ADC_synthase	Gene3D	69	547
IPR005801	ADC_synthase	SUPERFAMILY	95	544
IPR004561	IsoChor_synthase	TIGRFAM	186	543
IPR044250	MenF-like	PANTHER	28	553
IPR015890	Chorismate_C	Pfam	281	536

No CAZYmes available for this sequence

External Links

No external refs found!