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  5. Seita.2G201800.1

Seita.2G201800.1


Description : TBP-associated factor 2


Gene families : OG_01_0000997 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000997_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G201800.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11


Type GO Term Name Evidence Source
CC GO:0005669 transcription factor TFIID complex ISM GOs from InterProScan
MF GO:0008237 metallopeptidase activity ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016024 ARM-type_fold SUPERFAMILY 504 991
IPR042097 Aminopeptidase_N-like_N_sf Gene3D 18 302
IPR037813 TAF2 PANTHER 1 1310
IPR027268 Peptidase_M4/M1_CTD_sf Gene3D 308 556
IPR042097 Aminopeptidase_N-like_N_sf SUPERFAMILY 18 303
IPR014782 Peptidase_M1_dom Pfam 339 536
IPR011989 ARM-like Gene3D 694 983
IPR016024 ARM-type_fold SUPERFAMILY 504 991
IPR014782 Peptidase_M1_dom Pfam 339 537
IPR037813 TAF2 PANTHER 18 1295
IPR011989 ARM-like Gene3D 694 983
IPR027268 Peptidase_M4/M1_CTD_sf Gene3D 308 556
IPR042097 Aminopeptidase_N-like_N_sf Gene3D 18 302
IPR042097 Aminopeptidase_N-like_N_sf SUPERFAMILY 18 303

No CAZYmes available for this sequence

No external refs found!