Seita.2G203200.1

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG_01_0016471 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016471_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G203200.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR033275	MARCH-like	PANTHER	1	251
IPR022143	DUF3675	Pfam	115	228
IPR011016	Znf_RING-CH	SMART	62	109
IPR011016	Znf_RING-CH	Pfam	63	108
IPR011016	Znf_RING-CH	ProSiteProfiles	55	115
IPR013083	Znf_RING/FYVE/PHD	Gene3D	49	119
IPR033275	MARCH-like	PANTHER	1	277
IPR011016	Znf_RING-CH	ProSiteProfiles	55	115
IPR022143	DUF3675	Pfam	115	228
IPR011016	Znf_RING-CH	SMART	62	109
IPR011016	Znf_RING-CH	Pfam	63	108
IPR013083	Znf_RING/FYVE/PHD	Gene3D	49	119

No CAZYmes available for this sequence

External Links

No external refs found!