Seita.2G207300.1

Description : 26S proteasome regulatory subunit, putative

Gene families : OG_01_0009569 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009569_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G207300.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_166

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0043248	proteasome assembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0070682	proteasome regulatory particle assembly	ISM	GOs from InterProScan
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001478	PDZ	ProSiteProfiles	102	201
IPR035269	PSMD9	PANTHER	14	226
IPR036034	PDZ_sf	Gene3D	128	225
IPR001478	PDZ	SMART	122	201
IPR040815	Nas2_N	Pfam	25	102
IPR036034	PDZ_sf	SUPERFAMILY	143	224
IPR001478	PDZ	ProSiteProfiles	102	201
IPR001478	PDZ	SMART	122	201
IPR040815	Nas2_N	Pfam	25	102
IPR036034	PDZ_sf	Gene3D	128	225
IPR036034	PDZ_sf	SUPERFAMILY	143	224
IPR035269	PSMD9	PANTHER	9	225

No CAZYmes available for this sequence

External Links

No external refs found!