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  5. Seita.2G231000.1

Seita.2G231000.1


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0014053 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014053_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G231000.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_183


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 125 137
IPR002048 EF_hand_dom Pfam 116 178
IPR011992 EF-hand-dom_pair SUPERFAMILY 43 179
IPR002048 EF_hand_dom Pfam 91 107
IPR002048 EF_hand_dom ProSiteProfiles 112 147
IPR002048 EF_hand_dom CDD 116 178
IPR002048 EF_hand_dom ProSiteProfiles 148 183
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 161 173
IPR002048 EF_hand_dom SMART 116 144
IPR002048 EF_hand_dom SMART 83 111
IPR002048 EF_hand_dom SMART 152 180
IPR011992 EF-hand-dom_pair SUPERFAMILY 43 179
IPR002048 EF_hand_dom ProSiteProfiles 148 183
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 125 137
IPR002048 EF_hand_dom ProSiteProfiles 112 147
IPR002048 EF_hand_dom Pfam 116 177
IPR002048 EF_hand_dom CDD 116 178
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 161 173
IPR002048 EF_hand_dom SMART 116 144
IPR002048 EF_hand_dom SMART 83 111
IPR002048 EF_hand_dom SMART 152 180

No CAZYmes available for this sequence

No external refs found!