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  5. Seita.2G271500.1

Seita.2G271500.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0005363 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005363_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G271500.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 48 168
IPR000504 RRM_dom ProSiteProfiles 61 139
IPR000504 RRM_dom SMART 62 135
IPR000504 RRM_dom Pfam 63 132
IPR035979 RBD_domain_sf SUPERFAMILY 47 168
IPR000504 RRM_dom SMART 62 135
IPR034146 snRNP35_RRM CDD 58 147
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 48 168
IPR000504 RRM_dom ProSiteProfiles 61 139
IPR035979 RBD_domain_sf SUPERFAMILY 47 168
IPR000504 RRM_dom Pfam 63 132

No CAZYmes available for this sequence

No external refs found!