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  5. Seita.2G304400.1

Seita.2G304400.1


Description : trithorax-like protein 2


Gene families : OG_01_0007840 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007840_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G304400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_82


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019787 Znf_PHD-finger ProSiteProfiles 1440 1490
IPR001214 SET_dom SMART 1763 1890
IPR013083 Znf_RING/FYVE/PHD Gene3D 1427 1493
IPR032308 TDBD Pfam 218 269
IPR003616 Post-SET_dom ProSiteProfiles 1892 1908
IPR046341 SET_dom_sf Gene3D 1690 1908
IPR034732 EPHD ProSiteProfiles 1549 1678
IPR001214 SET_dom ProSiteProfiles 1763 1884
IPR001214 SET_dom Pfam 1774 1883
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 1443 1487
IPR011011 Znf_FYVE_PHD SUPERFAMILY 1434 1490
IPR046341 SET_dom_sf SUPERFAMILY 1758 1898
IPR001965 Znf_PHD SMART 1442 1488
IPR001965 Znf_PHD SMART 1622 1678
IPR001214 SET_dom Pfam 1774 1883
IPR001214 SET_dom SMART 1763 1890
IPR032308 TDBD Pfam 218 269
IPR013083 Znf_RING/FYVE/PHD Gene3D 1427 1493
IPR001214 SET_dom ProSiteProfiles 1763 1884
IPR011011 Znf_FYVE_PHD SUPERFAMILY 1434 1490
IPR019787 Znf_PHD-finger ProSiteProfiles 1440 1490
IPR034732 EPHD ProSiteProfiles 1549 1678
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 1443 1487
IPR001965 Znf_PHD SMART 1442 1488
IPR001965 Znf_PHD SMART 1622 1678
IPR003616 Post-SET_dom ProSiteProfiles 1892 1908

No CAZYmes available for this sequence

No external refs found!