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  5. Seita.2G307700.1

Seita.2G307700.1


Description : Regulator of chromosome condensation (RCC1) family protein


Gene families : OG_01_0009000 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009000_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G307700.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000408 Reg_chr_condens ProSiteProfiles 104 153
IPR009091 RCC1/BLIP-II Gene3D 223 431
IPR000408 Reg_chr_condens ProSiteProfiles 316 367
IPR000408 Reg_chr_condens PRINTS 156 172
IPR000408 Reg_chr_condens PRINTS 266 280
IPR000408 Reg_chr_condens PRINTS 357 375
IPR000408 Reg_chr_condens PRINTS 105 121
IPR000408 Reg_chr_condens PRINTS 137 150
IPR000408 Reg_chr_condens PRINTS 250 266
IPR000408 Reg_chr_condens ProSiteProfiles 154 205
IPR000408 Reg_chr_condens ProSiteProfiles 368 427
IPR000408 Reg_chr_condens ProSiteProfiles 264 315
IPR009091 RCC1/BLIP-II SUPERFAMILY 107 429
IPR000408 Reg_chr_condens ProSiteProfiles 206 263
IPR000408 Reg_chr_condens ProSitePatterns 302 312
IPR000408 Reg_chr_condens Pfam 263 312
IPR000408 Reg_chr_condens Pfam 367 424
IPR000408 Reg_chr_condens Pfam 103 150
IPR000408 Reg_chr_condens Pfam 205 260
IPR000408 Reg_chr_condens Pfam 153 202
IPR000408 Reg_chr_condens Pfam 315 364
IPR009091 RCC1/BLIP-II Gene3D 6 222
IPR000408 Reg_chr_condens ProSiteProfiles 32 104
IPR000408 Reg_chr_condens ProSitePatterns 302 312
IPR009091 RCC1/BLIP-II Gene3D 223 431
IPR009091 RCC1/BLIP-II Gene3D 6 222
IPR000408 Reg_chr_condens ProSiteProfiles 32 104
IPR009091 RCC1/BLIP-II SUPERFAMILY 107 429
IPR000408 Reg_chr_condens Pfam 103 150
IPR000408 Reg_chr_condens Pfam 34 100
IPR000408 Reg_chr_condens Pfam 367 424
IPR000408 Reg_chr_condens Pfam 205 260
IPR000408 Reg_chr_condens Pfam 315 364
IPR000408 Reg_chr_condens Pfam 153 202
IPR000408 Reg_chr_condens Pfam 263 312
IPR000408 Reg_chr_condens ProSiteProfiles 316 367
IPR000408 Reg_chr_condens ProSiteProfiles 154 205
IPR000408 Reg_chr_condens ProSiteProfiles 104 153
IPR000408 Reg_chr_condens PRINTS 156 172
IPR000408 Reg_chr_condens PRINTS 266 280
IPR000408 Reg_chr_condens PRINTS 357 375
IPR000408 Reg_chr_condens PRINTS 105 121
IPR000408 Reg_chr_condens PRINTS 137 150
IPR000408 Reg_chr_condens PRINTS 250 266
IPR000408 Reg_chr_condens ProSiteProfiles 206 263
IPR000408 Reg_chr_condens ProSiteProfiles 368 427
IPR000408 Reg_chr_condens ProSiteProfiles 264 315

No CAZYmes available for this sequence

No external refs found!