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  5. Seita.2G308700.1

Seita.2G308700.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0011935 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011935_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G308700.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001440 TPR_1 Pfam 279 310
IPR019734 TPR_repeat ProSiteProfiles 243 276
IPR011990 TPR-like_helical_dom_sf Gene3D 203 336
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 204 314
IPR019734 TPR_repeat ProSiteProfiles 277 310
IPR019734 TPR_repeat SMART 277 310
IPR019734 TPR_repeat SMART 205 238
IPR019734 TPR_repeat SMART 243 276
IPR019734 TPR_repeat ProSiteProfiles 243 276
IPR001440 TPR_1 Pfam 279 310
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 204 314
IPR019734 TPR_repeat ProSiteProfiles 277 310
IPR019734 TPR_repeat SMART 277 310
IPR019734 TPR_repeat SMART 205 238
IPR019734 TPR_repeat SMART 243 276
IPR011990 TPR-like_helical_dom_sf Gene3D 203 336

No CAZYmes available for this sequence

No external refs found!