Sevir.6G088900.1

Description : carboxyl terminus of HSC70-interacting protein

Gene families : OG_01_0003062 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003062_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G088900.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G088900.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_173
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_11

Type	GO Term	Name	Evidence	Source
BP	GO:0000209	protein polyubiquitination	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	ISM	GOs from InterProScan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003613	Ubox_domain	SMART	201	264
IPR003613	Ubox_domain	Pfam	198	270
IPR011990	TPR-like_helical_dom_sf	Gene3D	7	167
IPR045202	CHIP_RING-Ubox	CDD	198	264
IPR003613	Ubox_domain	ProSiteProfiles	197	271
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	14	135
IPR019734	TPR_repeat	Pfam	85	113
IPR013083	Znf_RING/FYVE/PHD	Gene3D	196	274
IPR019734	TPR_repeat	SMART	84	117
IPR019734	TPR_repeat	SMART	16	49
IPR019734	TPR_repeat	SMART	50	83

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.6G088900.1

Expression Profile

Co-expression Networks

Functional Annotation