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  5. Seita.2G372200.1

Seita.2G372200.1


Description : aminophospholipid ATPase 2


Gene families : OG_01_0000270 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000270_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G372200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISM GOs from InterProScan
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
MF GO:0005215 transporter activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0015914 phospholipid transport ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
MF GO:0140326 ATPase-coupled intramembrane lipid transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR023299 ATPase_P-typ_cyto_dom_N Gene3D 450 583
IPR006539 P-type_ATPase_IV NCBIfam 420 1022
IPR008250 ATPase_P-typ_transduc_dom_A_sf SUPERFAMILY 100 247
IPR044492 P_typ_ATPase_HD_dom SFLD 361 800
IPR023299 ATPase_P-typ_cyto_dom_N SUPERFAMILY 385 566
IPR018303 ATPase_P-typ_P_site ProSitePatterns 380 386
IPR032630 P_typ_ATPase_c Pfam 777 1016
IPR036412 HAD-like_sf SUPERFAMILY 373 804
IPR023298 ATPase_P-typ_TM_dom_sf SUPERFAMILY 13 1015
IPR032631 P-type_ATPase_N Pfam 5 69
IPR001757 P_typ_ATPase NCBIfam 716 832
IPR023214 HAD_sf Gene3D 601 789
IPR023299 ATPase_P-typ_cyto_dom_N Gene3D 450 583
IPR008250 ATPase_P-typ_transduc_dom_A_sf SUPERFAMILY 100 247
IPR006539 P-type_ATPase_IV TIGRFAM 420 1022
IPR018303 ATPase_P-typ_P_site ProSitePatterns 380 386
IPR023214 HAD_sf Gene3D 601 789
IPR044492 P_typ_ATPase_HD_dom SFLD 361 800
IPR001757 P_typ_ATPase TIGRFAM 716 832
IPR032631 P-type_ATPase_N Pfam 5 69
IPR036412 HAD-like_sf SUPERFAMILY 373 804
IPR032630 P_typ_ATPase_c Pfam 777 1016
IPR023299 ATPase_P-typ_cyto_dom_N SUPERFAMILY 385 566
IPR023298 ATPase_P-typ_TM_dom_sf SUPERFAMILY 13 1015

No CAZYmes available for this sequence

No external refs found!