Seita.2G396300.1

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0002459 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002459_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G396300.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019775	WD40_repeat_CS	ProSitePatterns	318	332
IPR001680	WD40_rpt	Pfam	293	331
IPR011044	Quino_amine_DH_bsu	SUPERFAMILY	185	411
IPR001680	WD40_rpt	ProSiteProfiles	299	340
IPR001680	WD40_rpt	SMART	193	248
IPR001680	WD40_rpt	SMART	335	374
IPR001680	WD40_rpt	SMART	292	331
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	163	413
IPR001680	WD40_rpt	Pfam	294	331
IPR001680	WD40_rpt	ProSiteProfiles	299	340
IPR011044	Quino_amine_DH_bsu	SUPERFAMILY	185	411
IPR019775	WD40_repeat_CS	ProSitePatterns	318	332
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	163	413
IPR001680	WD40_rpt	SMART	193	248
IPR001680	WD40_rpt	SMART	335	374
IPR001680	WD40_rpt	SMART	292	331

No CAZYmes available for this sequence

External Links

No external refs found!