Seita.2G408300.1

Description : Translation initiation factor IF6

Gene families : OG_01_0006860 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006860_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G408300.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0042255	ribosome assembly	None	Extended
BP	GO:0042256	cytosolic ribosome assembly	ISM	GOs from InterProScan
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
MF	GO:0043022	ribosome binding	ISM	GOs from InterProScan
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0140694	non-membrane-bounded organelle assembly	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002769	eIF6	CDD	2	223
IPR002769	eIF6	Pfam	4	203
IPR002769	eIF6	PANTHER	1	244
IPR002769	eIF6	SMART	3	204
IPR002769	eIF6	NCBIfam	4	224
IPR002769	eIF6	Hamap	1	245
IPR002769	eIF6	PIRSF	1	226
IPR002769	eIF6	TIGRFAM	4	224
IPR002769	eIF6	Pfam	4	203
IPR002769	eIF6	PIRSF	1	226
IPR002769	eIF6	CDD	2	223
IPR002769	eIF6	SMART	3	204
IPR002769	eIF6	Hamap	1	245
IPR002769	eIF6	PANTHER	1	245

No CAZYmes available for this sequence

External Links

No external refs found!