Seita.2G426600.1

Description : RNA binding

Gene families : OG_01_0013163 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013163_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G426600.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_37

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002478	PUA	SMART	158	233
IPR005155	UPF0113_PUA	Pfam	160	238
IPR036974	PUA_sf	Gene3D	157	243
IPR015947	PUA-like_sf	SUPERFAMILY	159	233
IPR005155	UPF0113_PUA	CDD	159	235
IPR040598	NIP7_N	Pfam	57	146
IPR040598	NIP7_N	CDD	57	151
IPR036974	PUA_sf	Gene3D	157	243
IPR002478	PUA	SMART	158	233
IPR040598	NIP7_N	Pfam	57	145
IPR015947	PUA-like_sf	SUPERFAMILY	159	233
IPR005155	UPF0113_PUA	Pfam	160	238

No CAZYmes available for this sequence

External Links

No external refs found!