Seita.2G439400.1

Description : RINT-1 / TIP-1 family

Gene families : OG_01_0005408 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005408_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G439400.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_115

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	ISM	GOs from InterProScan
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
CC	GO:0070939	Dsl1/NZR complex	ISM	GOs from InterProScan
CC	GO:0099023	vesicle tethering complex	None	Extended
CC	GO:0140534	endoplasmic reticulum protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007528	RINT1_Tip20	ProSiteProfiles	213	820
IPR007528	RINT1_Tip20	Pfam	314	816
IPR042044	EXOC6PINT-1/Sec15/Tip20_C_dom2	Gene3D	624	753
IPR007528	RINT1_Tip20	PANTHER	133	817
IPR042044	EXOC6PINT-1/Sec15/Tip20_C_dom2	Gene3D	624	753
IPR007528	RINT1_Tip20	ProSiteProfiles	213	820
IPR007528	RINT1_Tip20	Pfam	314	816
IPR007528	RINT1_Tip20	PANTHER	133	818

No CAZYmes available for this sequence

External Links

No external refs found!