Seita.2G445000.1

Description : 2-oxoglutarate dehydrogenase, E1 component

Gene families : OG_01_0006175 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006175_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.2G445000.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004591	oxoglutarate dehydrogenase (succinyl-transferring) activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006099	tricarboxylic acid cycle	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	ISM	GOs from InterProScan
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030976	thiamine pyrophosphate binding	ISM	GOs from InterProScan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0050997	quaternary ammonium group binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032106	2-oxogl_dehyd_N	Pfam	60	98
IPR005475	Transketolase-like_Pyr-bd	Pfam	632	845
IPR005475	Transketolase-like_Pyr-bd	SMART	633	846
IPR031717	KGD_C	Pfam	868	1009
IPR029061	THDP-binding	SUPERFAMILY	148	578
IPR011603	2oxoglutarate_DH_E1	PANTHER	51	1010
IPR042179	KGD_C_sf	Gene3D	864	1012
IPR001017	DH_E1	Pfam	241	562
IPR011603	2oxoglutarate_DH_E1	NCBIfam	62	1008
IPR029061	THDP-binding	SUPERFAMILY	616	852
IPR011603	2oxoglutarate_DH_E1	PIRSF	53	1011
IPR001017	DH_E1	Pfam	240	562
IPR011603	2oxoglutarate_DH_E1	PANTHER	1	1016
IPR011603	2oxoglutarate_DH_E1	PIRSF	53	1011
IPR005475	Transketolase-like_Pyr-bd	SMART	633	846
IPR042179	KGD_C_sf	Gene3D	864	1012
IPR005475	Transketolase-like_Pyr-bd	Pfam	632	847
IPR032106	2-oxogl_dehyd_N	Pfam	60	98
IPR029061	THDP-binding	SUPERFAMILY	148	578
IPR029061	THDP-binding	SUPERFAMILY	616	852
IPR011603	2oxoglutarate_DH_E1	TIGRFAM	62	1008
IPR031717	KGD_C	Pfam	868	1009

No CAZYmes available for this sequence

External Links

No external refs found!