Seita.3G003100.1

Description : DDB1-CUL4 associated factor 1

Gene families : OG_01_0002956 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002956_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G003100.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006594	LisH	ProSiteProfiles	1171	1203
IPR016024	ARM-type_fold	SUPERFAMILY	108	1110
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	1489	1705
IPR033270	VPRBP/DCAF1	PANTHER	28	1910
IPR006594	LisH	SMART	1171	1203
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	1485	1812
IPR001680	WD40_rpt	SMART	1574	1612
IPR001680	WD40_rpt	SMART	1529	1569
IPR001680	WD40_rpt	SMART	1487	1526
IPR033270	VPRBP/DCAF1	PANTHER	27	1898
IPR016024	ARM-type_fold	SUPERFAMILY	108	1110
IPR006594	LisH	SMART	1171	1203
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	1485	1812
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	1489	1705
IPR001680	WD40_rpt	SMART	1574	1612
IPR001680	WD40_rpt	SMART	1529	1569
IPR001680	WD40_rpt	SMART	1487	1526
IPR006594	LisH	ProSiteProfiles	1171	1203

No CAZYmes available for this sequence

External Links

No external refs found!