Sevir.6G102000.1

Description : like SEX4 1

Gene families : OG_01_0006847 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006847_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G102000.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G102000.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_153
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_130

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005983	starch catabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009251	glucan catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
MF	GO:0019203	carbohydrate phosphatase activity	ISM	GOs from InterProScan
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046838	obsolete phosphorylated carbohydrate dephosphorylation	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032640	AMPK1_CBM	Pfam	458	539
IPR029021	Prot-tyrosine_phosphatase-like	Gene3D	284	444
IPR045204	DSP_laforin-like	CDD	290	436
IPR014756	Ig_E-set	SUPERFAMILY	454	539
IPR013783	Ig-like_fold	Gene3D	445	541
IPR029021	Prot-tyrosine_phosphatase-like	SUPERFAMILY	283	422

No CAZYmes available for this sequence

External Links

No external refs found!