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  5. Sevir.6G102800.1

Sevir.6G102800.1


Description : SECY homolog 1


Gene families : OG_01_0011556 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011556_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G102800.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G102800.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_206
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_52


Type GO Term Name Evidence Source
BP GO:0015031 protein transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR030659 SecY_CS ProSitePatterns 194 213
IPR023201 SecY_dom_sf Gene3D 133 539
IPR002208 SecY/SEC61-alpha TIGRFAM 142 539
IPR030659 SecY_CS ProSitePatterns 286 303
IPR026593 SecY Hamap 131 543
IPR023201 SecY_dom_sf SUPERFAMILY 135 533
IPR002208 SecY/SEC61-alpha Pfam 195 526
IPR002208 SecY/SEC61-alpha PANTHER 63 548

No CAZYmes available for this sequence

No external refs found!