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  5. Seita.3G060600.1

Seita.3G060600.1


Description : S-locus lectin protein kinase family protein


Gene families : OG_01_0000036 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000036_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G060600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7


Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0004674 protein serine/threonine kinase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006468 protein phosphorylation ISM GOs from InterProScan
BP GO:0048544 recognition of pollen ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 660 672
IPR003609 Pan_app SMART 392 469
IPR000719 Prot_kinase_dom Pfam 542 809
IPR036426 Bulb-type_lectin_dom_sf Gene3D 23 183
IPR024171 SRK-like_kinase PIRSF 1 839
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 28 181
IPR001480 Bulb-type_lectin_dom SMART 34 186
IPR003609 Pan_app ProSiteProfiles 383 470
IPR001480 Bulb-type_lectin_dom CDD 35 186
IPR000858 S_locus_glycoprot_dom Pfam 278 362
IPR000719 Prot_kinase_dom SMART 540 812
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 546 568
IPR000719 Prot_kinase_dom ProSiteProfiles 540 815
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 81 247
IPR001480 Bulb-type_lectin_dom Pfam 94 212
IPR011009 Kinase-like_dom_sf SUPERFAMILY 526 813
IPR003609 Pan_app Pfam 391 450
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 28 181
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 660 672
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 81 247
IPR011009 Kinase-like_dom_sf SUPERFAMILY 526 813
IPR000858 S_locus_glycoprot_dom Pfam 278 362
IPR003609 Pan_app ProSiteProfiles 383 470
IPR001480 Bulb-type_lectin_dom CDD 35 186
IPR003609 Pan_app SMART 392 469
IPR001480 Bulb-type_lectin_dom Pfam 94 212
IPR000719 Prot_kinase_dom Pfam 542 809
IPR000719 Prot_kinase_dom ProSiteProfiles 540 815
IPR024171 SRK-like_kinase PIRSF 1 839
IPR000719 Prot_kinase_dom SMART 540 812
IPR001480 Bulb-type_lectin_dom SMART 34 186
IPR003609 Pan_app Pfam 391 450
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 546 568
IPR036426 Bulb-type_lectin_dom_sf Gene3D 23 183

No CAZYmes available for this sequence

No external refs found!