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  5. Seita.3G086500.1

Seita.3G086500.1


Description : Proteasome component (PCI) domain protein


Gene families : OG_01_0001821 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001821_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G086500.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110


Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
CC GO:0005852 eukaryotic translation initiation factor 3 complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000717 PCI_dom SMART 295 385
IPR045237 COPS7/eIF3m PANTHER 109 402
IPR000717 PCI_dom Pfam 264 364
IPR036390 WH_DNA-bd_sf SUPERFAMILY 316 366
IPR027528 eIF3m Hamap 27 402
IPR040750 eIF3m_C_helix Pfam 368 396
IPR000717 PCI_dom ProSiteProfiles 196 367
IPR000717 PCI_dom SMART 295 385
IPR000717 PCI_dom ProSiteProfiles 196 367
IPR036390 WH_DNA-bd_sf SUPERFAMILY 316 366
IPR040750 eIF3m_C_helix Pfam 368 396
IPR000717 PCI_dom Pfam 265 364
IPR045237 COPS7/eIF3m PANTHER 1 414
IPR027528 eIF3m Hamap 27 402

No CAZYmes available for this sequence

No external refs found!