1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.3G115400.1

Seita.3G115400.1


Description : Zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_01_0007212 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007212_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G115400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003105 SRA_YDG ProSiteProfiles 83 232
IPR003105 SRA_YDG SMART 78 236
IPR045134 UHRF1/2-like PANTHER 1 430
IPR001841 Znf_RING SMART 326 382
IPR027370 Znf-RING_euk Pfam 326 356
IPR003105 SRA_YDG Pfam 87 235
IPR036987 SRA-YDG_sf Gene3D 67 249
IPR013083 Znf_RING/FYVE/PHD Gene3D 306 433
IPR001841 Znf_RING ProSiteProfiles 326 382
IPR017907 Znf_RING_CS ProSitePatterns 341 350
IPR015947 PUA-like_sf SUPERFAMILY 58 252
IPR003105 SRA_YDG SMART 78 236
IPR017907 Znf_RING_CS ProSitePatterns 341 350
IPR013083 Znf_RING/FYVE/PHD Gene3D 306 433
IPR018957 Znf_C3HC4_RING-type Pfam 326 382
IPR036987 SRA-YDG_sf Gene3D 67 249
IPR001841 Znf_RING ProSiteProfiles 326 382
IPR001841 Znf_RING SMART 326 382
IPR003105 SRA_YDG Pfam 87 235
IPR045134 UHRF1/2-like PANTHER 1 528
IPR003105 SRA_YDG ProSiteProfiles 83 232
IPR015947 PUA-like_sf SUPERFAMILY 58 252

No CAZYmes available for this sequence

No external refs found!