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  5. Sevir.6G111900.1

Sevir.6G111900.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0016801 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016801_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G111900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G111900.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt TIGRFAM 321 354
IPR002885 Pentatricopeptide_rpt TIGRFAM 285 317
IPR002885 Pentatricopeptide_rpt TIGRFAM 458 489
IPR011990 TPR-like_helical_dom_sf Gene3D 397 506
IPR011990 TPR-like_helical_dom_sf Gene3D 138 240
IPR011990 TPR-like_helical_dom_sf Gene3D 241 396
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 454 488
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 353 387
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 283 317
IPR002885 Pentatricopeptide_rpt Pfam 317 365
IPR002885 Pentatricopeptide_rpt Pfam 394 416
IPR002885 Pentatricopeptide_rpt Pfam 457 486
IPR002885 Pentatricopeptide_rpt Pfam 217 237
IPR002885 Pentatricopeptide_rpt Pfam 285 314
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 318 352

No CAZYmes available for this sequence

No external refs found!