Seita.3G196800.1

Description : SU(VAR)3-9 homolog 3

Gene families : OG_01_0007760 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007760_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G196800.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_168

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	ISM	GOs from InterProScan
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	ISM	GOs from InterProScan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	ISM	GOs from InterProScan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007728	Pre-SET_dom	ProSiteProfiles	444	505
IPR046341	SET_dom_sf	SUPERFAMILY	383	658
IPR001214	SET_dom	ProSiteProfiles	508	652
IPR007728	Pre-SET_dom	SMART	398	492
IPR046341	SET_dom_sf	Gene3D	391	680
IPR003105	SRA_YDG	SMART	217	373
IPR003105	SRA_YDG	ProSiteProfiles	222	369
IPR036987	SRA-YDG_sf	Gene3D	205	388
IPR003105	SRA_YDG	Pfam	220	373
IPR025794	H3-K9-MeTrfase_plant	ProSiteProfiles	69	680
IPR001214	SET_dom	Pfam	519	652
IPR001214	SET_dom	SMART	508	658
IPR007728	Pre-SET_dom	Pfam	402	500
IPR015947	PUA-like_sf	SUPERFAMILY	204	392
IPR001214	SET_dom	SMART	508	658
IPR007728	Pre-SET_dom	Pfam	402	500
IPR003105	SRA_YDG	SMART	217	373
IPR007728	Pre-SET_dom	SMART	398	492
IPR001214	SET_dom	ProSiteProfiles	508	652
IPR007728	Pre-SET_dom	ProSiteProfiles	444	505
IPR003105	SRA_YDG	Pfam	221	373
IPR025794	H3-K9-MeTrfase_plant	ProSiteProfiles	69	680
IPR001214	SET_dom	Pfam	519	652
IPR036987	SRA-YDG_sf	Gene3D	205	388
IPR015947	PUA-like_sf	SUPERFAMILY	204	392
IPR003105	SRA_YDG	ProSiteProfiles	222	369

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.3G196800.1

Expression Profile

Co-expression Networks

Functional Annotation