Seita.3G213700.1

Description : ubiquitin-protein ligase 4

Gene families : OG_01_0004088 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004088_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G213700.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	ISM	GOs from InterProScan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR035983	Hect_E3_ubiquitin_ligase	SUPERFAMILY	1134	1526
IPR000569	HECT_dom	CDD	1141	1531
IPR000569	HECT_dom	Pfam	1189	1533
IPR000569	HECT_dom	ProSiteProfiles	1157	1533
IPR000569	HECT_dom	SMART	1151	1533
IPR016024	ARM-type_fold	SUPERFAMILY	124	544
IPR045322	HECTD1/TRIP12-like	PANTHER	76	1533
IPR011989	ARM-like	Gene3D	106	554
IPR000569	HECT_dom	ProSiteProfiles	1157	1533
IPR000569	HECT_dom	CDD	1141	1531
IPR035983	Hect_E3_ubiquitin_ligase	SUPERFAMILY	1134	1526
IPR011989	ARM-like	Gene3D	106	554
IPR045322	HECTD1/TRIP12-like	PANTHER	17	1533
IPR016024	ARM-type_fold	SUPERFAMILY	124	544
IPR000569	HECT_dom	SMART	1151	1533
IPR000569	HECT_dom	Pfam	1188	1533

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.3G213700.1

Expression Profile

Co-expression Networks

Functional Annotation